PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kaladp0065s0023.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family GATA
Protein Properties Length: 140aa    MW: 15356.8 Da    PI: 10.3671
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kaladp0065s0023.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA58.11.1e-182155135
                 GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                         C+ Cgt kTplWR+gp g+k+LCnaCG+++rk+++
  Kaladp0065s0023.1.p 21 CAMCGTAKTPLWRSGPAGPKSLCNACGIKHRKRKS 55
                         9*******************************976 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF577165.23E-131365No hitNo description
PROSITE profilePS5011412.071551IPR000679Zinc finger, GATA-type
SMARTSM004011.5E-121567IPR000679Zinc finger, GATA-type
Gene3DG3DSA:3.30.50.101.4E-141954IPR013088Zinc finger, NHR/GATA-type
PfamPF003202.0E-162155IPR000679Zinc finger, GATA-type
CDDcd002022.03E-112168No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 140 aa     Download sequence    Send to blast
MDLSHQQETI MVVDTESKKC CAMCGTAKTP LWRSGPAGPK SLCNACGIKH RKRKSLMCKK  60
ERDKKIRQSD SVTNPAAASA ASTQSSSKWK PRLEKSSSAN LRQSLKDLAP LQRSLRRQRS  120
EEEEAAMLLM LLSCGCVFA*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLA0A0B0NK294e-25A0A0B0NK29_G
TrEMBLA0A0D2RA284e-25A0A0D2RA28_G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06740.15e-20GATA transcription factor 15